Installation
Python
Prerequisites:
- Python 3.8+ with pip
To install, run this command:
pip install pathling
R
Prerequisites:
- R >= 3.5.0 (tested with 4.3.1)
To install, run these commands:
# Install the `pathling` package.
install.packages('pathling')
# Install the Spark version required by Pathling.
pathling::pathling_install_spark()
Scala
To add the Pathling library to your project, add the following to your SBT configuration:
libraryDependencies += "au.csiro.pathling" % "library-runtime" % "[version]"
Java
To add the Pathling library to your project, add the following to
your pom.xml
:
<dependency>
<groupId>au.csiro.pathling</groupId>
<artifactId>library-runtime</artifactId>
<version>[version]</version>
</dependency>
Java Virtual Machine
All variants of the Pathling library require version 11 of a Java Virtual Machine (JVM) to be installed. We recommend using Azul OpenJDK, you can download installers for all major operating systems at the Azul OpenJDK web site.
Ensure that the JAVA_HOME
environment variable is set to the location of the
installation of Java 11.